Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015870571.1_cds_XP_016434157.1_30243
CDS Infomation

[gene=LOC107760596] [db_xref=GeneID:107760596] [protein=glucan endo-1,3-beta-D-glucosidase-like isoform X2] [protein_id=XP_016434157.1] [location=join(147964..148033,148419..148793,149354..149643,151465..151788,152392..152575,152682..152737,153558..153614)] [gbkey=CDS]
Sequence

ATGGCTACACAAAAGCTTTCTAGTTTCTTCTTTGTTTTCTTTGTTTTATTGCAATCTCTT
TCTTCCGCAGAATCTCAAGCTTTTATCGGCGTTAACTATGGACAACTCGCCGATAACCTC
CCGCCGGTGACGGAGACGGTGAAGCTCATTCAGTCGACGAGGATTGAGAAGGTGAGGTTG
TACGGGGCGGATCCAGCGATCATAAAAGCATTGGCGAACACCGGGATCGGAATTGTGATC
GGCGCTGCTAACGGCGATATACCGGCGCTCGCATCCGACCCGAATTTCGCGGGCCAATGG
GTTAATTCTAATGTGTTGGCTTATTATCCGGCGAGTAAGATTATTGTTGTTACTGTCGGT
AATGAAGTCGTGACCTCAGGAGATCAGAACCTTATTCCTCAACTTTTACCCGCCATGCAA
AATGTCCAAAACGCCCTTAATGCTGCTTCCCTTGGTGGGAGAATCAAGGTATCAACAGTA
CACGCCATGTCCATTTTGTCTCAGTCCGACCCGCCTTCTTCCGGGTTATTCAGTCCAGTA
TTTGGAGACACACTGAAAGCTTTGCTGCAATTTCACAAGGAAAATGGTTCACCTTTGATG
ATCAATCCATACCCATTCTTTGCATATCAGAGTGATCCAAGACCTGAAACCTTGGCATTC
TGTCTCTTCCAACCAAATGCTGGCCGGGTCGACTCAGGAAACGGTATCAAATACATGAAC
ATGTTTGATGCACAGGTTGATGCTGTACATTCTGCCCTGAATGCGTGGGGATTCAAAGAA
GTTCAAATTGTGGTTGCAGAGACAGGGTGGCCATACAAGGGAGACCCAAATGAAGTAGGC
CCAAGTGTAGATAATGCAAAAGCTTATAACGGTAACTTGATAAACCACTTGAGGTCTATG
GTTGGCACTCCAGTGATGCCTGGCATATCTGTGGATACCTATATATTTGCGCTCTATGAT
GAGGATTTGAAGCCTGGGCCTGGCTCGGAACGCTCATTTGGGCTTTTTAAACCTGATCTT
TCTGTGACTTATGATGTTGGCCTCTCAAAAAATGCGCAGACTCCTACAGCTCCAGTAACT
CCAGTGAGCCCTGCGCCAGCAACAACTCCTACTACACCAACAACTCCAGTAACTCCGGTT
ACACCAACACCAAAACCAACAGGATCTGCTTGGTGCATGCCAAAGCCGGGAACTCCTGAT
GCTGAATTACAGGCGAATCTTGACTATGCCTGTAGCCAGGCTGGAATCCCTGGAACTGCG
ACTTCTCTCAGACCGCTGCCCTCACCTCAACAAATCCTAGTTACGATGGTTGTACTTATC
CTGGTGGCAGCTTATGACGCAGAGAATCTACTTTAG

Peptide Sequence

PEP ID

XP_016434157.1
PEP Infomation

PREDICTED: glucan endo-1,3-beta-D-glucosidase-like isoform X2 [Nicotiana tabacum]
Sequence

MATQKLSSFFFVFFVLLQSLSSAESQAFIGVNYGQLADNLPPVTETVKLIQSTRIEKVRL
YGADPAIIKALANTGIGIVIGAANGDIPALASDPNFAGQWVNSNVLAYYPASKIIVVTVG
NEVVTSGDQNLIPQLLPAMQNVQNALNAASLGGRIKVSTVHAMSILSQSDPPSSGLFSPV
FGDTLKALLQFHKENGSPLMINPYPFFAYQSDPRPETLAFCLFQPNAGRVDSGNGIKYMN
MFDAQVDAVHSALNAWGFKEVQIVVAETGWPYKGDPNEVGPSVDNAKAYNGNLINHLRSM
VGTPVMPGISVDTYIFALYDEDLKPGPGSERSFGLFKPDLSVTYDVGLSKNAQTPTAPVT
PVSPAPATTPTTPTTPVTPVTPTPKPTGSAWCMPKPGTPDAELQANLDYACSQAGIPGTA
TSLRPLPSPQQILVTMVVLILVAAYDAENLL

Transcript Sequence

Gene sequence data has not been registered.